PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62027848-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ZF-HD | ||||||||
Protein Properties | Length: 259aa MW: 27298.6 Da PI: 9.2192 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 106.8 | 1.3e-33 | 40 | 95 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 vrY+eClkNhA+++GghavDGCgEfm++ geegt +alkCaAC+CHRnFHR+e++ AUR62027848-RA 40 VVRYRECLKNHAVNIGGHAVDGCGEFMAA-GEEGTLDALKCAACNCHRNFHRKETDI 95 689*************************9.999********************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MAVVVPPSYD PIGGSGGNSA PSRPRVSSAS GGGGERRSVV VRYRECLKNH AVNIGGHAVD 60 GCGEFMAAGE EGTLDALKCA ACNCHRNFHR KETDISGDNI TSPNTGPSPA VAPPPPAGTM 120 YPQFSGYYRT PPPPGSGYHH HYRPLAVLPS TSGGTHSGDM GDDMSHPSSS GGEGRRESGS 180 GGVGGGGSAM MMVPKKRHRT KFSQEQKDKM LAFAEKLGWR IQKHDEAAVQ QFCAEVQVTP 240 QVLKVWMHNN KHTLGKKP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18350.1 | 9e-47 | ZF-HD family protein |