PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62027824-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 107aa MW: 11952.5 Da PI: 9.2377 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.9 | 2.4e-10 | 40 | 70 | 1 | 31 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas 31 +r++h ++Er+RR+++N+ ++ +r+l+P+++ AUR62027824-RA 40 QRMTHIAVERNRRKQMNEYLAVIRSLMPPSY 70 79**************************963 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 107 aa Download sequence |
LYQSGEAPAP STAAEPPVSG GVRRKRRRRS CKNKEEVEHQ RMTHIAVERN RRKQMNEYLA 60 VIRSLMPPSY VQRVEEGCQL NSVDDIAAAA NHILGQIKEE AVDQSL* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 23 | 29 | RRKRRRR |
2 | 24 | 28 | RKRRR |
3 | 24 | 30 | RKRRRRS |
4 | 41 | 52 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G22490.1 | 4e-23 | bHLH family protein |