PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027424-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 142aa    MW: 15956.3 Da    PI: 10.7238
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027424-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH284e-094183754
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ++ r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  AUR62027424-RA 41 IAARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 83
                    56799*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MAAMREMIFR IAAMQPIYID PEAVKPPKRR NVRISKDPQS IAARHRRERI SERIRILQRL  60
VPGGTKMDTA SMLDEAIHYV KFLKSQVQTL ERSAINNNNR PVPPPVSTGL GYPSGYSFAG  120
HQLHMNAAPH HNVQQYSDSD A*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.16e-45bHLH family protein