PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027064-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 320aa    MW: 36190.2 Da    PI: 6.5177
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027064-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.4e-12148194455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++Er+RR+++N++f  L   +P +     kK++Ka++L  A++Y+k+L+
  AUR62027064-RA 148 DHIIAERKRREKLNQRFIALTATIPGL-----KKMDKASVLGDAIKYVKQLE 194
                     699************************.....9*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEASMITGFT DMELDDFSFI DHLLQVNSSS LEQIDLFGPP LLPSYEEDTY KKDTNYNQLQ  60
VKRSPQIDHH TIVEEKPLIK QHITNNWNSS YEIDHAFTSQ DDDYSNMNML SFSSSSSSIN  120
SQNCIPKATQ VAKKSSAALA SLSQQPKDHI IAERKRREKL NQRFIALTAT IPGLKKMDKA  180
SVLGDAIKYV KQLEKQVKKL EEVTKTKTIE SAVLVKRSRV FEEEENDQFI KEGPLYPEIE  240
AKFSNKDVLI RINCEKKNGV VEKIISHIEN LHLVVINSST LVFGCSSIDA TIIAQMDAEF  300
SMTSKDLVRH LHAALKRLL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153158ERKRRE
2154159RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-46bHLH family protein