PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62026904-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 345aa MW: 39416.9 Da PI: 6.94

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62026904-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158	3.9e-49	38	167	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv++yLk+kve+++ e+ik++diyk++PwdL ++ + ++kewyf++kr +ky+++ r+nr+t sg+Wkatg d++++ + AUR62026904-RA 38 PGFRFHPTDEELVSFYLKRKVEKRRPLSIEIIKQIDIYKHDPWDLAkASSSIGDKEWYFYCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYFNg 132 9********************99555599**********844566699***********************************85 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +glkk+Lv+y+g+a kg+ktdW+mhe+rl AUR62026904-RA 133 geGPQCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 167 544455*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MKSCCIQDDM QQETMSSSSK DVVVVEGGVV DDHEGPLPGF RFHPTDEELV SFYLKRKVEK 60 RRPLSIEIIK QIDIYKHDPW DLAKASSSIG DKEWYFYCKR GRKYRNSIRP NRVTGSGFWK 120 ATGIDRPIYF NGGEGPQCIG LKKSLVYYRG SAGKGTKTDW MMHEFRLPND LQQQDEANLA 180 NPKDTALEAE IWTLCRIFKR NKRHTPDWRE LSNKKNAINS SSKTSSIDSN TNQECYINFA 240 THQSSTPNNG YSNLFIPKEE DNTNNVCIGT QNITTGDEKN AHFQADHQQQ LSHMAHTPSC 300 TTRPSMLDHV LTNDGNDLQY FAYYEHNWDD LNSVVELAVK NPFL*

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MKSCCIQDDM QQETMSSSSK DVVVVEGGVV DDHEGPLPGF RFHPTDEELV SFYLKRKVEK  60
RRPLSIEIIK QIDIYKHDPW DLAKASSSIG DKEWYFYCKR GRKYRNSIRP NRVTGSGFWK  120
ATGIDRPIYF NGGEGPQCIG LKKSLVYYRG SAGKGTKTDW MMHEFRLPND LQQQDEANLA  180
NPKDTALEAE IWTLCRIFKR NKRHTPDWRE LSNKKNAINS SSKTSSIDSN TNQECYINFA  240
THQSSTPNNG YSNLFIPKEE DNTNNVCIGT QNITTGDEKN AHFQADHQQQ LSHMAHTPSC  300
TTRPSMLDHV LTNDGNDLQY FAYYEHNWDD LNSVVELAVK NPFL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12910.1	1e-79	NAC family protein