PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026301-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 352aa    MW: 38869.8 Da    PI: 8.6768
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026301-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-10146193455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  AUR62026301-RA 146 SHSLAERARREKISERMRILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 193
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MDPQTTLMNE TASFNLSQIW PIPLNGVAAT GLDLRRSPFG PSLARFIDPG PNLEVSGSDG  60
GDCVFSRYAS TPLIGRRDGE KEQEKRPSDS DGKRLKSTGS GDENQNQKAN NETTSGKGGE  120
QKSKPVSDPS KDYIHVRARR GQATDSHSLA ERARREKISE RMRILQDLVP GCNKVIGKAL  180
VLDEIINYIQ SLQRQVEFLS MKLEAVNTRT SPGIEGFPSK DRIFLIAVND TVNYESASYC  240
FTGAAKLQSV GQYFSWTSNG LGSTRVMSWI DRALGNACKM QEMENVKVYY LNPSVSDHSP  300
LLIDSGVEIR QGGKPFKFFN SMCEHHGFEQ TVVASWTKTV LVLLYKRFGV N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.22e-71bHLH family protein