PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026062-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MIKC_MADS
Protein Properties Length: 271aa    MW: 30154.1 Da    PI: 4.8357
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026062-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF76.42.2e-2485132350
                     --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF   3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 
                     ie++ +rqvtfskRr+g++KKA+E+S+LC  eva++ifs+t+k+yey 
  AUR62026062-RA  85 IEDTGKRQVTFSKRRKGLIKKASEISILCKCEVALMIFSNTNKMYEYR 132
                     99*********************************************6 PP
2K-box37.88.2e-141822383389
           K-box  33 reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqe 89 
                      e+ ++lG +Le L+++eL++Le +L ++ + +R++K e + ++ eel+k  +elq+
  AUR62026062-RA 182 IELSQMLGIGLEHLNYNELHNLEMKLTDGFRYVRNRKAEEMEKENEELRKEVEELQQ 238
                     56789*********************************************9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MSLESFWKRA GKSQKSSTCS SPSSRNPPIE EDVVTPIDDV DIESPNDDAD VVSPNKDAVP  60
VAASIPIPEN TTQTMGRGKV PIQYIEDTGK RQVTFSKRRK GLIKKASEIS ILCKCEVALM  120
IFSNTNKMYE YRSCNRTMDS FATMHRNIIA AASSSKSANV GPIILPEDDP DVDVATLREA  180
LIELSQMLGI GLEHLNYNEL HNLEMKLTDG FRYVRNRKAE EMEKENEELR KEVEELQQCL  240
KRKRADAGVM TDEGYITGKG FESDDILSLG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22630.11e-22MIKC_MADS family protein