PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62026061-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 264aa MW: 29521.4 Da PI: 7.7097 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79 | 3.2e-25 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k ien+ nrqvtfskRr+g++KKA+ELSvLCd ++a+iifs tgk y++ AUR62026061-RA 9 KTIENTNNRQVTFSKRRAGLIKKANELSVLCDCDIALIIFSCTGKKYDFV 58 68*******************************************99996 PP | |||||||
2 | K-box | 60.5 | 6.8e-21 | 103 | 184 | 18 | 99 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +++ +++e+ +L+ + +l+G++Le L++ eLq Le+qL +++ +iR+kK+++l+eq e+++++e++++een aLrk+++ AUR62026061-RA 103 DSDVNSMREELTKLRASCLQLQGKGLEGLNFLELQTLEKQLLEGIMSIRNKKERMLREQWERSKQQEEKISEENAALRKEVQ 184 57899**************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MGRGKIMIKT IENTNNRQVT FSKRRAGLIK KANELSVLCD CDIALIIFSC TGKKYDFVSS 60 KTTMENMLQR YKDFVANHSA TAASNSSNDA ATVEHQLVEY NPDSDVNSMR EELTKLRASC 120 LQLQGKGLEG LNFLELQTLE KQLLEGIMSI RNKKERMLRE QWERSKQQEE KISEENAALR 180 KEVQRLRQCS KASCSSESNS LKRKRAAAGL STDEGSVMEK EVESDQPFLS LGLPTTRFCG 240 EVIPKTESTS NDSIGENPAT YES* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 4e-40 | MIKC_MADS family protein |