PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025981-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 282aa    MW: 31427.3 Da    PI: 5.8783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025981-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.31.8e-051331721255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     RR++iN ++  L+el+P +    +k    a +L + ++++++Lq
  AUR62025981-RA 133 RREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQYLQ 172
                     ******************9....899999*************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MENNTSYPFG EEFQKLIIAP ENGNSFTALL GAFSHSLSSL PALPSNRALI ERAAKYSVFA  60
NEDSSSPELK VKTEPLDDAG SNPNSGSDPT AGSESDKEKP LKRKEREKKG KGSSKKNKTT  120
SEDDEKLPYV HARREKINAR MKLLQELVPG CNKISGTALV LDEIINHVQY LQRQVEYLSM  180
RLAAVNPRID FNLDSLISGT ESVMDCNLPN MTMPLMWPEI HVNGDRQQFQ QQWHHLEALS  240
QPVWVKEENH PNLVASENSL MTYDSTANSA SLHSSQLKME M*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.25e-50bHLH family protein