PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025963-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 359aa    MW: 39661.9 Da    PI: 9.1187
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025963-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.64.7e-13269314655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR+ri +++ +L++l+P+     +k  + +++L +Av+YIk+Lq
  AUR62025963-RA 269 SIAERMRRNRISERMRKLQDLVPNM----DKQTNTSDMLDLAVDYIKNLQ 314
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MDSYIEPQFL SHNHHQQQQN NSGLLRFRSA PSSLFNELTQ NSSDSEKFNG RITDDFFESY  60
ERKPQNLMVG GGGGGNEQSS QLPPQYPKLN TSSSMDRSTI NLSTTRQGNC GLNLNRQSSS  120
PAGFFNHLNN TQNGYTIMRG IGNFRVGNGT SGESSPRASR LNMGLLPRIP ELGNEIVKET  180
SPDEVKFRNH ENDAGFDSTS PTGYPYVPWN DSTSDASFHL SENGGITSRS AGLTHHSAEM  240
AAVEKLLHFQ EVVPCKVRAK RGCATHPRSI AERMRRNRIS ERMRKLQDLV PNMDKQTNTS  300
DMLDLAVDYI KNLQNQYKEN IWLANRGRNA NSAVAICSSS VLKTSLPSRS LITSSANG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.14e-46bHLH family protein