PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62025839-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 197aa MW: 21114.3 Da PI: 9.8273 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.5 | 1.2e-08 | 95 | 142 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+++Er RR +iN+++ L++++P + k + a +L + ++Y++sLq AUR62025839-RA 95 SHSIAERVRRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 142 8*************************9....3559999***********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MFGKTHVLEQ AQADSAVLSG NGNECSGSGT TNKRKPEDLQ ESSSSLYSSS PTSNDRARKK 60 NSSNRGKRSK NNDKDEGNPK EVVHVRARRG QATDSHSIAE RVRRGKINER LRCLQDIVPG 120 CYKTMGMAVM LDEIINYVQS LQNQVEGRGK EIVGAAGEFL GGQRPQRSGT GSPVAWSLET 180 GCGEGGSGSF GLREGR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73830.1 | 3e-42 | bHLH family protein |