PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62025636-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 355aa MW: 41347 Da PI: 5.0747

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62025636-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.3	1.3e-35	17	153	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdL.pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrF+P+deel+++yL +k++g+ l+ + ++++++y P+dL p ++e+ wyfF++ ++ y++g+r++r++ +gyWk tgk+ ++++ AUR62025636-RA 17 PPGFRFDPKDEELITHYLVPKINGEALPP-NKMHDAELYGErAPQDLiPYYEPESENTWYFFTRLERLYENGSRPRRSAGNGYWKMTGKEIPITN 110 9***********************999.77999999965494455556788********************************** PP NAM 95 kkgelvglkktLvfy.........kgrapkgektdWvmheyrl 128 k+g+++g ++ ++f+ ++++pkg kt W+mhe+r+ AUR62025636-RA 111 KQGNVIGFRRNFAFFikiepslpkQKDEPKGIKTPWLMHEFRV 153 ***********999999997789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MASSSYEMVD YYWNMIPPGF RFDPKDEELI THYLVPKING EALPPNKMHD AELYGERAPQ 60 DLIPYYEPES ENTWYFFTRL ERLYENGSRP RRSAGNGYWK MTGKEIPITN KQGNVIGFRR 120 NFAFFIKIEP SLPKQKDEPK GIKTPWLMHE FRVNNVPSTS EPKSKRRKTN YHDGTSPSQG 180 SKPKNMLDGW VLCKVYRLVR DVEVEALNPA HQEEEQHQAI EQPVALNNEA NNDLLQRDVV 240 SMVEEQGVEQ HVVALNNGAN DDLIIPKIEV EYSFEHLHHN QEDNLQYLQR DVTVVEAPNS 300 AHQHLQYYHQ GVEQPAALND LLDYTFQHQQ HNQDMPQFSQ EDSEFLYNIF PRCD*

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MASSSYEMVD YYWNMIPPGF RFDPKDEELI THYLVPKING EALPPNKMHD AELYGERAPQ  60
DLIPYYEPES ENTWYFFTRL ERLYENGSRP RRSAGNGYWK MTGKEIPITN KQGNVIGFRR  120
NFAFFIKIEP SLPKQKDEPK GIKTPWLMHE FRVNNVPSTS EPKSKRRKTN YHDGTSPSQG  180
SKPKNMLDGW VLCKVYRLVR DVEVEALNPA HQEEEQHQAI EQPVALNNEA NNDLLQRDVV  240
SMVEEQGVEQ HVVALNNGAN DDLIIPKIEV EYSFEHLHHN QEDNLQYLQR DVTVVEAPNS  300
AHQHLQYYHQ GVEQPAALND LLDYTFQHQQ HNQDMPQFSQ EDSEFLYNIF PRCD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	1e-34	NAC family protein