PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62024698-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 150aa MW: 17465.1 Da PI: 9.3019 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.2 | 2.3e-51 | 10 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deelv++yL kk+++++ ++ e+d++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd+ +l+ AUR62024698-RA 10 LPPGFRFYPSDEELVCHYLYKKIANEEALK-GTLVEIDLHTCEPWQLPEVAKLNTTEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRVILDP 103 79***********************99544.78***************88888999*************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++e vg++ktLvfyk+rap+g kt W+mhe+rle AUR62024698-RA 104 rTQEIVGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 138 66777***************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 150 aa Download sequence |
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KIANEEALKG TLVEIDLHTC EPWQLPEVAK 60 LNTTEWYFFS FRDRKYATGF RTNRATTSGY WKATGKDRVI LDPRTQEIVG MRKTLVFYKN 120 RAPNGIKTGW IMHEFRLESP HMPPKLYNE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G28530.1 | 6e-85 | NAC family protein |