PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024373-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 340aa    MW: 37904.8 Da    PI: 5.2731
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024373-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.92.3e-051712101255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     RR++iN ++  L+el+P +    +k    a +L + ++++++Lq
  AUR62024373-RA 171 RREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQYLQ 210
                     ******************9....899999*************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MENNTSYPFG EEFQKLIIAP ENGNSFTALL GLPPNQAMEL LTDDSSAXXX XXXXXXXXGG  60
DVVKRHRISA FNHSLSSLPA LPSNRALIER AAKYSVFANE DSSSPELKVK SEPLDDAGSN  120
PNSGSDPTAG SESDKEKPLK RKEREKKGKG SSKKNKATSE DDEKLPYVHA RREKINARMK  180
LLQELVPGCN KISGTALVLD EIINHVQYLQ RQVEYLSMRL AAVNPRIDFN LDSLISGTES  240
VMDCNLPNMT MPLMWPEIHV NGDRQQFQQQ WHPLEALSQP VWVKEENHPN LVASENSLMT  300
YDSPANSGAS KCSWLSEDEP GLLQMNGVDH LNLNWVWFR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.24e-60bHLH family protein