PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024365-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 272aa    MW: 29715.2 Da    PI: 9.2048
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024365-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.1e-13209254655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR+ri +++ +L++l+P+     +k  + +++L +Av+YIk+Lq
  AUR62024365-RA 209 SIAERMRRNRISERMRKLQDLVPNM----DKQTNTSDMLDLAVDYIKNLQ 254
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MVGSGGGGGG EQSSQLPPQY PKINTSSSMD RSTINLLTTR QGNCGLNLNR QSSSPAGFFN  60
HLNNTQNGYT IMRGIGNFRV GNGTSGESSP RASRLNMSLM PRIPELGNEI VKETSADEGK  120
FRNHESDAGF DSTSPTGYPF VPWNDSTSDA SLHLSENGGI TSRSAGLTHH LSLPKTSAEM  180
AAVEKLLHFQ DVVPCKVRAK RGCATHPRSI AERMRRNRIS ERMRKLQDLV PNMDKQTNTS  240
DMLDLAVDYI KNLQNQYKVP FCSRPKDVED L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-49bHLH family protein