PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62024101-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28076.9 Da PI: 9.4659 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 160.9 | 5.1e-50 | 31 | 176 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......v.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppGfrFhPtdeel+++yL+ kv +++ ++++ v i evd++++ePwdLp+++k +e+ewy +s rd+ky++g r+nrat++gyWkatg AUR62024101-RA 31 LPPGFRFHPTDEELITFYLASKVFNTTPTTTNlflsnsgVqIIEVDLTRCEPWDLPERAKMGEREWYLYSLRDRKYPSGLRTNRATETGYWKATG 125 79**********************99944434555556655***************99999********************************** PP NAM 88 kdkevlsk..........kgelvglkktLvfykgrapkgektdWvmheyrl 128 kdk+v+++ +g l+g+kktLvfy+grap+g+kt+W+mheyrl AUR62024101-RA 126 KDKQVYATgitttagsggGGMLIGMKKTLVFYQGRAPRGVKTKWIMHEYRL 176 *******977777766666666***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MWKVEDVLRE LKEEGIFEEN NGKFSDKDGG LPPGFRFHPT DEELITFYLA SKVFNTTPTT 60 TNLFLSNSGV QIIEVDLTRC EPWDLPERAK MGEREWYLYS LRDRKYPSGL RTNRATETGY 120 WKATGKDKQV YATGITTTAG SGGGGMLIGM KKTLVFYQGR APRGVKTKWI MHEYRLDGHF 180 SSFRLSSKVL IHTMLSEKAD IRRMGDMQNI PQECRKEILS TNSSSTFFAT AAAAAAFISF 240 PKQFTSFG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76420.1 | 8e-63 | NAC family protein |