PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023517-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 361aa MW: 39842.6 Da PI: 6.9256

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023517-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	19.9	1.7e-06	218	270	7	62
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++r+q N ArrsR RK+++i+eLe+ +++L+a + +le l ++ l +e AUR62023517-RA 218 AKRRQHN---ARRSRVRKLQYIAELERNAQVLQAAGAEVSAQLEFLDQQNLILGME 270 5788888...************************9999888888888877766666 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MLAECMANTP EGFSDIQSGP CRGPMSLPPK GPSQALYCGP ISSEKQDNVP KSCFTDILYE 60 EPPPWLEDLL NEPESPINRT HRRSASDSSA YFAVDNSADE LWLRNIIGAL SCSNQMPHNF 120 NGIPQASFNT EKSNSAITSN KQQQDKLGKS PSTSTPPSLP NGLINAKEDA DCQALGMSCS 180 PEPDIIKSVG SKPEMENSSG GGSDCSHLKP PATLNTDAKR RQHNARRSRV RKLQYIAELE 240 RNAQVLQAAG AEVSAQLEFL DQQNLILGME NRALKQRLES LSQEHYIKSM EQEILDKELA 300 RLQYLYQLQR NLSHNQQRPR QKQNPAVHRR GKSYNDVDSQ LSKLSLHPPK TVAPSNAALE 360 *

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MLAECMANTP EGFSDIQSGP CRGPMSLPPK GPSQALYCGP ISSEKQDNVP KSCFTDILYE  60
EPPPWLEDLL NEPESPINRT HRRSASDSSA YFAVDNSADE LWLRNIIGAL SCSNQMPHNF  120
NGIPQASFNT EKSNSAITSN KQQQDKLGKS PSTSTPPSLP NGLINAKEDA DCQALGMSCS  180
PEPDIIKSVG SKPEMENSSG GGSDCSHLKP PATLNTDAKR RQHNARRSRV RKLQYIAELE  240
RNAQVLQAAG AEVSAQLEFL DQQNLILGME NRALKQRLES LSQEHYIKSM EQEILDKELA  300
RLQYLYQLQR NLSHNQQRPR QKQNPAVHRR GKSYNDVDSQ LSKLSLHPPK TVAPSNAALE  360
*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	233	RRQHNARRSRVRKL
2	226	232	RRSRVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.1	5e-43	bZIP family protein