PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023449-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 583aa MW: 64807.8 Da PI: 7.0346

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023449-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.7e-13	412	458	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq AUR62023449-RA 412 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYITELQ 458 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MGGGVVWNEE DKAMIASILG TRAFDYLISS PFTAETSLVS LENNENIQNK LSDLVERPNA 60 SNFSWNYGFF WQISRAKSGE VVLSWGDGYC REPREGEESE ATRLLNFRLE DESHQKIRKR 120 VLQKLNTLFG GSDDDNLACR LDRVTDMEMF FLVSMYFSFP RGEGGPGSCF ASGKHVWESD 180 LLRAKSDFCV RSFLAKSAGI QTVILIPTES GVVELGSVRA IGENHNVLKA LKYAFSTPPA 240 PVVHPKPAPV FPMNLNTTVR PPFREKLAVK RMEDRHWDGY ANGNKLSFTG QSPRNNGIQS 300 VQCTNWANIP GVKHATATEL YSPQNTRLQE YVNGIRSEYR LNQFHQQKPA QMEIDFTGAT 360 SRPTVASQPG SAESEHSDPE VSGRDDRAGP SDDRKPRKRG RKPANGREEP LNHVEAERQR 420 REKLNQRFYA LRAVVPNISK MDKASLLGDA ISYITELQKK LKDMEAEREK HNSTSRDTSG 480 MEANSVAEVQ GQAPEVELQA LHDEVVVKVS CPLDSHPVAR IIRAFKDSEI NVVDSKLAAG 540 TDTVFHTFVI KPQGSEPLTK EKVLAAFSHD SKSLQAPPST GE*

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MGGGVVWNEE DKAMIASILG TRAFDYLISS PFTAETSLVS LENNENIQNK LSDLVERPNA  60
SNFSWNYGFF WQISRAKSGE VVLSWGDGYC REPREGEESE ATRLLNFRLE DESHQKIRKR  120
VLQKLNTLFG GSDDDNLACR LDRVTDMEMF FLVSMYFSFP RGEGGPGSCF ASGKHVWESD  180
LLRAKSDFCV RSFLAKSAGI QTVILIPTES GVVELGSVRA IGENHNVLKA LKYAFSTPPA  240
PVVHPKPAPV FPMNLNTTVR PPFREKLAVK RMEDRHWDGY ANGNKLSFTG QSPRNNGIQS  300
VQCTNWANIP GVKHATATEL YSPQNTRLQE YVNGIRSEYR LNQFHQQKPA QMEIDFTGAT  360
SRPTVASQPG SAESEHSDPE VSGRDDRAGP SDDRKPRKRG RKPANGREEP LNHVEAERQR  420
REKLNQRFYA LRAVVPNISK MDKASLLGDA ISYITELQKK LKDMEAEREK HNSTSRDTSG  480
MEANSVAEVQ GQAPEVELQA LHDEVVVKVS CPLDSHPVAR IIRAFKDSEI NVVDSKLAAG  540
TDTVFHTFVI KPQGSEPLTK EKVLAAFSHD SKSLQAPPST GE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	394	402	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-177	bHLH family protein