PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62023163-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 252aa MW: 28738.8 Da PI: 9.1129 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1.1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s AUR62023163-RA 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 97.1 | 2.6e-32 | 83 | 172 | 10 | 99 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ es+++e+ kLk++ e+Lqr+qR+llGedL++L++keL qLe+qLe+slk+iRs+K++ +++q+ +lq+ke++l e+nk+L+++l+ AUR62023163-RA 83 PSKELESSYREYLKLKARHESLQRTQRNLLGEDLGPLNVKELDQLERQLETSLKQIRSTKTQSMVDQLTDLQHKEHALMEANKSLKTELD 172 567899********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSG 60 PSMLKTLERY QKCSYGGVEI NKPSKELESS YREYLKLKAR HESLQRTQRN LLGEDLGPLN 120 VKELDQLERQ LETSLKQIRS TKTQSMVDQL TDLQHKEHAL MEANKSLKTE LDRIMIKDAQ 180 YRQSWDGTDQ NVHYGQQHAQ SQGLLNFQPL GCNPTLQIGY NPETTEQMSV ATTHAQVPGF 240 LPGWMQGGCF S* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 1e-118 | MIKC_MADS family protein |