PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023044-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 463aa MW: 51427 Da PI: 8.0517

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023044-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.7	2.5e-28	67	124	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vk+s +rsYYrCt +C++kkkv+r + +k+++++Y+geHnh+ AUR62023044-RA 67 SDGYSWRKYGQKQVKSSGSSRSYYRCTDLSCCAKKKVQRLDVSGKIIDVVYKGEHNHK 124 7********************************************************7 PP
2	WRKY	103.8	9.7e-33	292	350	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 l+Dgy+WrKYGqK+vkg+++prsYYrC+sagCpv+k+ver++++ +++++tYeg+H+h+ AUR62023044-RA 292 LNDGYRWRKYGQKMVKGNPNPRSYYRCSSAGCPVRKHVERATDNSTAIIVTYEGKHDHD 350 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MSHQEALANV TAKAAQAHPQ MQLQAADTKP LIKSFSKDKV EEPEIKIMNS SCNADNSPDD 60 TPKTPISDGY SWRKYGQKQV KSSGSSRSYY RCTDLSCCAK KKVQRLDVSG KIIDVVYKGE 120 HNHKPPQIFK GSSRKKDYAP LALNKSSIRS LDSPNSLACE QELKQLVPSS HECQDSNLKC 180 AAETPSRDAE EQHIETVDTT LRQVLFYYEI AIVLRNLPES ELAIVPAVEE HSGLRSETPS 240 ERAMIDPMKE LDVAPLKKRR IKERGKACSE PVYRTFKDPK IVTHEAEGGG MLNDGYRWRK 300 YGQKMVKGNP NPRSYYRCSS AGCPVRKHVE RATDNSTAII VTYEGKHDHD VPIPKKQYYV 360 ASPNAMASGA NMLLDKTEIK PQSRGSSEER LDKTEIKSQS QGSSEEQLDK TDIKSQPHGA 420 VEERPKDLDS DLGEEKGSEA GADKVLESAR MLLSIGIELK SC*

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MSHQEALANV TAKAAQAHPQ MQLQAADTKP LIKSFSKDKV EEPEIKIMNS SCNADNSPDD  60
TPKTPISDGY SWRKYGQKQV KSSGSSRSYY RCTDLSCCAK KKVQRLDVSG KIIDVVYKGE  120
HNHKPPQIFK GSSRKKDYAP LALNKSSIRS LDSPNSLACE QELKQLVPSS HECQDSNLKC  180
AAETPSRDAE EQHIETVDTT LRQVLFYYEI AIVLRNLPES ELAIVPAVEE HSGLRSETPS  240
ERAMIDPMKE LDVAPLKKRR IKERGKACSE PVYRTFKDPK IVTHEAEGGG MLNDGYRWRK  300
YGQKMVKGNP NPRSYYRCSS AGCPVRKHVE RATDNSTAII VTYEGKHDHD VPIPKKQYYV  360
ASPNAMASGA NMLLDKTEIK PQSRGSSEER LDKTEIKSQS QGSSEEQLDK TDIKSQPHGA  420
VEERPKDLDS DLGEEKGSEA GADKVLESAR MLLSIGIELK SC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	257	262	KKRRIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	4e-67	WRKY family protein