PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022690-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 572aa MW: 64944.4 Da PI: 6.9806

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022690-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.7	3.8e-52	8	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eelv +yLk kv++ k++ +vi e+d+y++ePwd++ k k+ e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v AUR62022690-RA 8 VPPGFRFHPTEEELVGYYLKGKVNSLKFDR-DVIIEIDLYRMEPWDIQdKcKLGYdERNEWYFFSHKDRKYPTGSRTNRATAAGFWKATGRDKAV 101 69*************************9.99**********943433333556******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ls k++ +g++ktLvfykgrap+g+ktdW+mheyrl AUR62022690-RA 102 LS-KNNIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 136 .8899***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MNHTELCVPP GFRFHPTEEE LVGYYLKGKV NSLKFDRDVI IEIDLYRMEP WDIQDKCKLG 60 YDERNEWYFF SHKDRKYPTG SRTNRATAAG FWKATGRDKA VLSKNNIIGM RKTLVFYKGR 120 APNGRKTDWI MHEYRLQTSE HAPPQAKGWV VCRAFKKPSP SHKQGFEAWS HHQNQYYYMR 180 SNNYDRHIGS PSIPDTSSPN TDPSDSINQC HTNFHNPQSQ PMQQLPYTNF NPELIIENQL 240 IIDLPRLDSP SLSTSFATKE AYEHHQQSGG IVNEEHHHND HERSNKWEIL DNLLGNSSSF 300 SNNDLPNMHL VPHDYELEVQ NQLGTIGDES ELQESLLISE VDGQTSHQVI ISPYSKAGFF 360 SKATFYWVGF LISKGNHKTS LDLDDVPPLP RDNDASELFV MFSKSFEHAN GKVTSMQLFK 420 SMIIMSWPNI LWTFVLSLVD TLAIYVGPYL IDSFVQYLNG VKVSSTTKSL LLTVRHVFVS 480 HSAGEGQGLA RTGYVLISAF VVAKLVSCVL EMHSNFRVAI IMLKTRAALI QSIYTKALTL 540 PCTSKEEGCT TGELINVMSV DAERVTRFAA C*

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MNHTELCVPP GFRFHPTEEE LVGYYLKGKV NSLKFDRDVI IEIDLYRMEP WDIQDKCKLG  60
YDERNEWYFF SHKDRKYPTG SRTNRATAAG FWKATGRDKA VLSKNNIIGM RKTLVFYKGR  120
APNGRKTDWI MHEYRLQTSE HAPPQAKGWV VCRAFKKPSP SHKQGFEAWS HHQNQYYYMR  180
SNNYDRHIGS PSIPDTSSPN TDPSDSINQC HTNFHNPQSQ PMQQLPYTNF NPELIIENQL  240
IIDLPRLDSP SLSTSFATKE AYEHHQQSGG IVNEEHHHND HERSNKWEIL DNLLGNSSSF  300
SNNDLPNMHL VPHDYELEVQ NQLGTIGDES ELQESLLISE VDGQTSHQVI ISPYSKAGFF  360
SKATFYWVGF LISKGNHKTS LDLDDVPPLP RDNDASELFV MFSKSFEHAN GKVTSMQLFK  420
SMIIMSWPNI LWTFVLSLVD TLAIYVGPYL IDSFVQYLNG VKVSSTTKSL LLTVRHVFVS  480
HSAGEGQGLA RTGYVLISAF VVAKLVSCVL EMHSNFRVAI IMLKTRAALI QSIYTKALTL  540
PCTSKEEGCT TGELINVMSV DAERVTRFAA C*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71930.1	1e-104	NAC family protein