PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022685-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 375aa MW: 41416.3 Da PI: 5.0544

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022685-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.4	1.4e-32	55	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......tk 79 lp+G++F+P+d++l+ e+L++k+ + + +++ +i++++ i++++P+dLp ++++ ++++fF+k++++ya+g+rk+r+ + AUR62022685-RA 55 LPAGVKFDPSDSQLL-EHLAAKCGAGEakshafIDE--FIPTLEmdkgICYTHPQDLPG-ATKDGTSIHFFHKTSNAYASGQRKRRKihndqnQE 145 799**********.9999988454433222..2333323355******4.45667899**************856665555 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 + +W++tgk+k+v++ +g ++g+kk++v+yk + +k++k++Wvmh+y+l AUR62022685-RA 146 NVRWHKTGKTKPVCD-NGVQKGCKKIMVLYKSseKGSKPVKSNWVMHQYHL 195 899********.999*******6422667888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MAKSWLVDCK GIAKKVRHAS LPSGVQIKDC GAKRECPKCH HWIDNSDVSY EWPGLPAGVK 60 FDPSDSQLLE HLAAKCGAGE AKSHAFIDEF IPTLEMDKGI CYTHPQDLPG ATKDGTSIHF 120 FHKTSNAYAS GQRKRRKIHN DQNQENVRWH KTGKTKPVCD NGVQKGCKKI MVLYKSSEKG 180 SKPVKSNWVM HQYHLGSEDD EKDDAFVVSK IFYQQSKQTE TEDNGVAATD DSNAVLNPYC 240 PKTPKIVTPY LPRGSSAHCD DALDDIMLTA AEDTTCAKIE SCFTPSTSYM GDVELPECLA 300 GESQAQDPGV NDIDDPLLCK EIFSSCAPLD DTMSLNDLDD YCQSYGISNF DTELQFTELP 360 FGSQDSVLNW LDKP*

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MAKSWLVDCK GIAKKVRHAS LPSGVQIKDC GAKRECPKCH HWIDNSDVSY EWPGLPAGVK  60
FDPSDSQLLE HLAAKCGAGE AKSHAFIDEF IPTLEMDKGI CYTHPQDLPG ATKDGTSIHF  120
FHKTSNAYAS GQRKRRKIHN DQNQENVRWH KTGKTKPVCD NGVQKGCKKI MVLYKSSEKG  180
SKPVKSNWVM HQYHLGSEDD EKDDAFVVSK IFYQQSKQTE TEDNGVAATD DSNAVLNPYC  240
PKTPKIVTPY LPRGSSAHCD DALDDIMLTA AEDTTCAKIE SCFTPSTSYM GDVELPECLA  300
GESQAQDPGV NDIDDPLLCK EIFSSCAPLD DTMSLNDLDD YCQSYGISNF DTELQFTELP  360
FGSQDSVLNW LDKP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	6e-97	NAC family protein