PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022678-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 257aa    MW: 28691.8 Da    PI: 10.2694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022678-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27e-144293155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  AUR62022678-RA 42 QRMTHIAVERNRRRQMNEHLNALRSLMPPS---YVQRGDQASIIGGAIDFVKELE 93
                    79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
STKKTQFVKT CTTAPAAAPV KEKRKRKRAT RPAKNKQEVE TQRMTHIAVE RNRRRQMNEH  60
LNALRSLMPP SYVQRGDQAS IIGGAIDFVK ELEQMLQSLQ AQKKMRQTEE NGDVSVSPSS  120
SNLNNLSINS NMFMASPSFH SLEDGKGNGE SGEGSIRKSN EEFSAEKKTG IAEIEVVVIQ  180
NHVNLKIKCQ RRQGQLIKAI VAFEELRLTV LHLNITSLHT LVHYSFNLKI EDDCKLGTAD  240
DVARAVHQIF SLINLS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14354RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01460.17e-70bHLH family protein