PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022659-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 458aa MW: 50539.2 Da PI: 6.6441

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022659-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.6e-12	285	330	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++Ns+f Lr ++P +++Ka+ L Av YI++L AUR62022659-RA 285 NHVEAERQRREKMNSRFYALRAVVPMV-----SRMDKASLLADAVSYINEL 330 799*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MDENVVFSSS SSSSLISPSP QTLKQQLEFL LQNQQHWWNY AIFWQTCTNN NNNVVNPSCS 60 LSLVWGEGHF QGINNPTTRP KKKPNLVLSD DFDDGGSSMD DVVTDAEWFY MTSPSKSYPF 120 KQRASGGGSS GTLAKAFTTG SLVWLSGAHS LRLYNCERAK EAHSHGLHTL VCIPVPNGVL 180 ELGSVEVIEE NWALIQQAHF LFGPLSNFDI GPTKPGLSLG GGEDISFHDS GLIGAFNTNQ 240 AQPASFMGPS EEYDDSDEPL SRQRVVRKRG RRPGTAREGQ ATVVNHVEAE RQRREKMNSR 300 FYALRAVVPM VSRMDKASLL ADAVSYINEL KDKVNVLESQ LQMMKVDCNM FSSITNDTGL 360 CSPSGINCNN NIYNSKIPLE IDVRVLGNEA MIRVQCENVN HPAARLMNVL KQLKLQVHHA 420 SVSTVEEMML QDVVIVKVPQ DLKSNAILKA AIISRLQ*

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MDENVVFSSS SSSSLISPSP QTLKQQLEFL LQNQQHWWNY AIFWQTCTNN NNNVVNPSCS  60
LSLVWGEGHF QGINNPTTRP KKKPNLVLSD DFDDGGSSMD DVVTDAEWFY MTSPSKSYPF  120
KQRASGGGSS GTLAKAFTTG SLVWLSGAHS LRLYNCERAK EAHSHGLHTL VCIPVPNGVL  180
ELGSVEVIEE NWALIQQAHF LFGPLSNFDI GPTKPGLSLG GGEDISFHDS GLIGAFNTNQ  240
AQPASFMGPS EEYDDSDEPL SRQRVVRKRG RRPGTAREGQ ATVVNHVEAE RQRREKMNSR  300
FYALRAVVPM VSRMDKASLL ADAVSYINEL KDKVNVLESQ LQMMKVDCNM FSSITNDTGL  360
CSPSGINCNN NIYNSKIPLE IDVRVLGNEA MIRVQCENVN HPAARLMNVL KQLKLQVHHA  420
SVSTVEEMML QDVVIVKVPQ DLKSNAILKA AIISRLQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-61	bHLH family protein