PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022652-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 283aa    MW: 29960.1 Da    PI: 7.0332
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022652-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.23.1e-13218263655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k+Lq
  AUR62022652-RA 218 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKNLQ 263
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MQDTAGGGGG GGGNELTRAS GLARFRSAPA TWLDALLEDD DSLKLSGPHN THQGGLTQLL  60
TAGTNTSSAA GPGPIPVSRP NTSYNISPAD PGFFEGGGAQ PPGNTVAFQR MNSSPAEFLS  120
ANIDGYFSSF GIPSNYDFGG SGGGGGGSSV DVSGSGKRLR ENDSEQHSPN FSSHRRGEQS  180
GQLSTASSLV EMEMEKLLED SVPCRVRAKR GCATHPRSIA ERVRRTRISD RIRKLQELVP  240
NMDKQTNTAD MLEEAVEYVK NLQRQIQDLT EQQKKCKCVA KS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.18e-66bHLH family protein