PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022271-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 323aa    MW: 36001.7 Da    PI: 5.4346
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022271-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.5e-07259297952
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 
                      r+RR+ri +++  L++l+P        K++ a++L +A +Y+k
  AUR62022271-RA 259 ARQRRERISERLRVLQKLVPGG-----SKMDTASMLDEAANYLK 297
                     69******************95.....5**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDGCTSMAQW SNIYHQQCGI ETSRSISTLI LDPIHEELHQ EENDGQGIII PWNNEGAPRN  60
NQMCSSLPMI ISPFSNNIIH QSQPFDKSTN NKGTSSANNS FDQQSFECLL SGTNSNTDTS  120
VEDDGISIIF SDCRNFFNFN NSNNGENQND NEPKKRGNNI EQDFQGDPQE FPPFRITQEN  180
SCSPSLRPSR HKGSSNISFQ QGSSSGSSIE EPDAEAIQQM KEMIYRAAAF RPVNFGVDLV  240
ERPKRKNVRI SSDPQTVAAR QRRERISERL RVLQKLVPGG SKMDTASMLD EAANYLKVRF  300
DSIPPSNKGT VCVKSYGIKD HL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1260265RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.12e-39bHLH family protein