PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021917-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 555aa MW: 59981.2 Da PI: 6.5658

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021917-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.8e-31	283	341	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ AUR62021917-RA 283 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 341 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MNIHRQSAEH DRDQRHDDDD QNQDKKKVVE EASSRDHHQS AITALPDSAP LLDNNNVNTG 60 LHLLTTNTGS DQSTVDDGAS SDAEDKRNKN ELVLLQAELQ RMNTENQKLK SMLNQMSNSY 120 NSLQLHLVNV MQHQQQQNLR KGENSQHEAI MQGKAEEKPM VPRQFLDLVS GANTETDERT 180 SQTLSDDERT VDRSGSPLNS MEVASRANNN KELNLANYDN GKRIREESPE GSDAQGWGHN 240 KVPKLMNNVV KPTSPPVDQA AAEATMRKAR VSVRARSEAP MISDGCQWRK YGQKMAKGNP 300 CPRAYYRCTM AVGCPVRKQV QRCAEDRSIL ITTYEGNHNH PLPPAAMAMA STTSAAASML 360 LSGSMPSGDG LMNPNFLART ILPCSSSMAT ISASAPFPTV TLDLTHSPNP LQMRQSVPQT 420 NGPFQVPFQP QTSQVGPNFL GSIPQIFGQA LLNSTTNNNN NQSKFSGLQT TTPQGLDASH 480 LQHPNQNPAF ADTLSAATAA IANDPNFTAA LAAAISSIIG GARGPADNNN GPSDATTNGN 540 NANNVTTSSS MQQQ*

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MNIHRQSAEH DRDQRHDDDD QNQDKKKVVE EASSRDHHQS AITALPDSAP LLDNNNVNTG  60
LHLLTTNTGS DQSTVDDGAS SDAEDKRNKN ELVLLQAELQ RMNTENQKLK SMLNQMSNSY  120
NSLQLHLVNV MQHQQQQNLR KGENSQHEAI MQGKAEEKPM VPRQFLDLVS GANTETDERT  180
SQTLSDDERT VDRSGSPLNS MEVASRANNN KELNLANYDN GKRIREESPE GSDAQGWGHN  240
KVPKLMNNVV KPTSPPVDQA AAEATMRKAR VSVRARSEAP MISDGCQWRK YGQKMAKGNP  300
CPRAYYRCTM AVGCPVRKQV QRCAEDRSIL ITTYEGNHNH PLPPAAMAMA STTSAAASML  360
LSGSMPSGDG LMNPNFLART ILPCSSSMAT ISASAPFPTV TLDLTHSPNP LQMRQSVPQT  420
NGPFQVPFQP QTSQVGPNFL GSIPQIFGQA LLNSTTNNNN NQSKFSGLQT TTPQGLDASH  480
LQHPNQNPAF ADTLSAATAA IANDPNFTAA LAAAISSIIG GARGPADNNN GPSDATTNGN  540
NANNVTTSSS MQQQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	1e-113	WRKY family protein