PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021825-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-YB

Protein Properties

Length: 272aa MW: 30662.7 Da PI: 5.9922

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021825-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	173.9	1.7e-54	148	244	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dyvepl++yl++yreleg AUR62021825-RA 148 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYVEPLTLYLHRYRELEG 242 69********************************************************************************************9 PP NF-YB 96 ek 97 e+ AUR62021825-RA 243 EH 244 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
TDRFGFGPAC SERDIDINQM PNPAVPIEFS YVIVVISNFC TSDACRLGNI HVSCGGFNFD 60 KGPTIHPTML RRISDDDCLV NNGDPLGQSE VLIFEYYKMK LSSKAAVAGE MNHIRATING 120 KVLSHDMNNN FNGSGNHSAD QNNNECTVRE QDRFMPIANV IRIMRKILPP HAKISDDAKE 180 TIQECVSEYI SFITGEANER CQREQRKTIT AEDVLWAMSK LGFDDYVEPL TLYLHRYREL 240 EGEHGSIRTC EPLLKLSRAA MDHFEPYGRH K*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	9e-69	NF-YB family protein