PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021813-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YB
Protein Properties Length: 189aa    MW: 21483.1 Da    PI: 6.5809
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021813-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB175.26.4e-5545141197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yreleg
  AUR62021813-RA  45 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEG 139
                     69********************************************************************************************* PP

           NF-YB  96 ek 97 
                     e+
  AUR62021813-RA 140 ER 141
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MNHIRATING KLLSHDMTNH LNNLNGNSSN HSLSSTDQDN NECTVREQDR FMPIANVIRI  60
MRKILPPHAK ISDDAKETIQ ECVSEYISFI TGEANERCQR EQRKTITAED VLWAMSKLGF  120
DDYIEPLTLY LHRYRELEGE RGSIRTCEPL LKLSRAAMDQ YAAFGPVFHI GPPPSHHHHA  180
YFGDSSSF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.24e-74NF-YB family protein