PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021777-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 315aa    MW: 33338.1 Da    PI: 6.3754
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021777-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.12.8e-071982381155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  AUR62021777-RA 198 ARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 238
                     6******************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDPPLISEGS FSTANPSMAE IWPFNGGGDS DGGGMLGLRM SSGSGGFVSS LIDGLLNNSV  60
VGVMNRDTSI EESTVTDQSG SRGGGRKRRE NVSEDESSKI VSTTSSGNEL KESNGKRTKT  120
SSQDENGSSK AGGESNSAGG NKPADKSAEP PKDYIHVRAR RGQATDSHSL AERSLDLRKN  180
TPVASAAVFT HYICFWQARR EKISERMKIL QDLVPGCNKV IGKALVLDEI INYIQSLQRQ  240
VEFLSMKLEA VNSGMVPSIG GFHSKDANQL GMSSFDPSMM LAQAARELAA AAGGGGPQSE  300
WLHMQLGGSF ERTS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.12e-66bHLH family protein