PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021710-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TCP

Protein Properties

Length: 557aa MW: 59692.6 Da PI: 6.4041

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021710-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.9	2.6e-40	261	374	1	89
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg...... 88 aa+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + AUR62021710-RA 261 AAPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSLSVPsqlrss 355 689*******************************************************************9998777777777755555655333 PP TCP 89 ..................k 89 AUR62021710-RA 356 ssyfspnfttaasasrrnF 374 3344444444444443330 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MVADKGKKLK ATEKNDEENA EQIDSELVLS IEKLQEIQDD LEKINEKASD EVLEVEKRYN 60 EVRKPVYDRR NEIIKSIPDF WLTAFLSHPA LSELVTEEDH KVFKHLTSID VEDSKDVKSG 120 YSITFNFSPN PYFEDTKLTK TFTFLDEGTT KVTATSIKWK EGMGIPNGVD NDKKGNKRAH 180 IEESFFSWFS ETQQTDDDIH DELLEKKEEE ACSSSTPFNP SLAIAPSGSS GPGPSTSAGP 240 PQAQPPVGGG ESSSGPNSKK AAPKRTSTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG 300 HKSDGETIEW LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSSLSVPS QLRSSSSYFS 360 PNFTTAASAS RRNFFAGIGL SSDTSPSSAL LNFQTATLNL NPGLLQAKQE CTTTTSSSHH 420 HSHHNNNAGS AAAAVMSGDP IWTIPSVNNS AGLYRGSVPS GLHFMNFATP MALLPSQQLG 480 PQMGSGAGNN NNSGGGGGSG HNNMSPGEQA HHLGLLTGLN PYRSVQGGGI SDSQASGSHS 540 HHGDDRHDTT SHSHHS*

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MVADKGKKLK ATEKNDEENA EQIDSELVLS IEKLQEIQDD LEKINEKASD EVLEVEKRYN  60
EVRKPVYDRR NEIIKSIPDF WLTAFLSHPA LSELVTEEDH KVFKHLTSID VEDSKDVKSG  120
YSITFNFSPN PYFEDTKLTK TFTFLDEGTT KVTATSIKWK EGMGIPNGVD NDKKGNKRAH  180
IEESFFSWFS ETQQTDDDIH DELLEKKEEE ACSSSTPFNP SLAIAPSGSS GPGPSTSAGP  240
PQAQPPVGGG ESSSGPNSKK AAPKRTSTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG  300
HKSDGETIEW LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSSLSVPS QLRSSSSYFS  360
PNFTTAASAS RRNFFAGIGL SSDTSPSSAL LNFQTATLNL NPGLLQAKQE CTTTTSSSHH  420
HSHHNNNAGS AAAAVMSGDP IWTIPSVNNS AGLYRGSVPS GLHFMNFATP MALLPSQQLG  480
PQMGSGAGNN NNSGGGGGSG HNNMSPGEQA HHLGLLTGLN PYRSVQGGGI SDSQASGSHS  540
HHGDDRHDTT SHSHHS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	8e-44	TCP family protein