PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021652-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 362aa MW: 40521.2 Da PI: 6.7927

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021652-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.8	3.5e-56	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL++kv + ++++ ++i evd++k+ePwdLpk++k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ AUR62021652-RA 16 LPPGFRFHPTDEELISHYLAPKVIDINFSA-RAIGEVDLNKCEPWDLPKRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR- 108 79************************99.89***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkg k++Wvmheyrle AUR62021652-RA 109 GKSLVGMKKTLVFYKGRAPKGAKSNWVMHEYRLE 142 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MENMSVLAGD QEPMDLPPGF RFHPTDEELI SHYLAPKVID INFSARAIGE VDLNKCEPWD 60 LPKRAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV 120 FYKGRAPKGA KSNWVMHEYR LEGKSSLQNL PSNAKNEWVI CRVFQKSAAG KKIPFPGLIQ 180 PDSFGADFNP SSNLPPLMDS SPYNTNYGAP HVSCFSNPME TTAQTSHYHN TNQQPSFDGL 240 INNPYNSIPS NPSDNPYFRF GSGNSSYYPS SQTGHYSGNY MMSEQHILKA ILENHGTEMK 300 QSMKTEVVNY SASQDTGLSS DMNAEISSVV SNYDMSRRPF DDPDGPSTSG GPVDLDTLWN 360 Y*

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MENMSVLAGD QEPMDLPPGF RFHPTDEELI SHYLAPKVID INFSARAIGE VDLNKCEPWD  60
LPKRAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV  120
FYKGRAPKGA KSNWVMHEYR LEGKSSLQNL PSNAKNEWVI CRVFQKSAAG KKIPFPGLIQ  180
PDSFGADFNP SSNLPPLMDS SPYNTNYGAP HVSCFSNPME TTAQTSHYHN TNQQPSFDGL  240
INNPYNSIPS NPSDNPYFRF GSGNSSYYPS SQTGHYSGNY MMSEQHILKA ILENHGTEMK  300
QSMKTEVVNY SASQDTGLSS DMNAEISSVV SNYDMSRRPF DDPDGPSTSG GPVDLDTLWN  360
Y*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-137	NAC family protein