PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62021364-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 168aa MW: 18505.8 Da PI: 8.5018 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 74.7 | 2.3e-23 | 54 | 165 | 1 | 99 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kvegk+ ++++ +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ AUR62021364-RA 54 LPAGVKFDPTDQELI-EHLEAKVEGKSskshplIDEFIpTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 146 799************.99********96665443333333666646**********.555666799******************73334555544 PP NAM 80 sgyWkatgkdkevlskkgel 99 + +W++tgk+++v++ +g++ AUR62021364-RA 147 ETRWHKTGKTRPVMV-NGKQ 165 778***********9.4444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MNNNNSSNKS QLSSISSASD LIDAKLEEHQ LCGSKQCPGC GHRLEGSKPD WVGLPAGVKF 60 DPTDQELIEH LEAKVEGKSS KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV TRDGLSRHFF 120 HRPSKAYTTG TRKRRKIQTE CDLQGGETRW HKTGKTRPVM VNGKQKG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 3e-90 | NAC family protein |