PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62021282-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 199aa MW: 22595.8 Da PI: 9.0354 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.1 | 1.4e-12 | 63 | 115 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +++ h e+Er+RR+++ + ++ Lr+llP ++K s +e ++A++YIk+L+ AUR62021282-RA 63 KKVIHREVERQRRQEMSNLYSSLRSLLPVeY---VKGKRSVSEHITEATRYIKDLE 115 5778*************************77...9******************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MFPFQSVAAG TTTTNIDPVH QPHYGVDSKL KSPKTRKLRS GKSVQDNKIN NEDEIKGNDI 60 TNKKVIHREV ERQRRQEMSN LYSSLRSLLP VEYVKGKRSV SEHITEATRY IKDLEKNIEI 120 TAGVEEDDPC PISKTLKVLA QEGLDVVSCV SNKVNQRWIY VIYCEHAYST VYLRATEEGW 180 SGIEPKPLER LKVLLVPK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 6e-22 | bHLH family protein |