PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021101-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 356aa    MW: 39388.9 Da    PI: 7.116
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021101-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.84.6e-28120178259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D+++WrKYGqK++kgs++pr+YYrC+s  gC+++k+vers  dp++ ++tY+++H+h+
  AUR62021101-RA 120 SDKWAWRKYGQKPIKGSPYPRNYYRCSSIkGCSARKQVERSPIDPNFYIVTYTNNHHHP 178
                     79************************9987****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MNNSIGFLLP SGAAATTAPA ADEVSALEDE LKKLCRPFLV PQPPVVSSDK TEPVVGAGGT  60
SSNQLVEQTS RQHLYPRRFH IIPNQNSSTA LCGGRPCNYK KKKFEDRRMV RLTMEELSSS  120
DKWAWRKYGQ KPIKGSPYPR NYYRCSSIKG CSARKQVERS PIDPNFYIVT YTNNHHHPCP  180
SIHHTTRPRV RIAARSEPTP PPELEESPTN TVLGPGYGSG PVGNEVIEIE HVAGDDSFSS  240
GEMNEGSYNY NDHEMLTMPM NSMSCSDLLS GMDDLNSTNN NYYSYYNENN VGYNRGCDPN  300
VKMGVRMEEN GSGHGVGIRE MYASAPATLA GAHQPPSNMG QNSHNNIWDN GMIRPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-32WRKY family protein