PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020945-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 1163aa MW: 130584 Da PI: 6.6403

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020945-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	78.2	9.1e-25	58	116	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqKe+ gs++prsY+rCt++ gC + kkv+r + ++++ +i Y+g H+++ AUR62020945-RA 58 DDGYSWRKYGQKEILGSKYPRSYFRCTYKeeGCAAVKKVQRID-EGDAYQISYKGLHTCS 116 8*************************9999******9.************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1163 aa Download sequence
MKAFLSCFCK EKNPIGVRPG YETDGNGSRC FGGKLSLGGL KRMAAIEPRM VVVQELTDDG 60 YSWRKYGQKE ILGSKYPRSY FRCTYKEEGC AAVKKVQRID EGDAYQISYK GLHTCSNGAR 120 IIRSTSGASD SQSFKISFGV DDCRALEAPT VLTGTESFTI TGIPFFGSKG TNTPDSERET 180 YAKCSQNHNA DVTSQIRLDE SIISTIHNAD VTSQIRQDES IIPTIHNVDS TFSANDKTTK 240 EGEIETSLTH CRLRNVVNLG FNSWPTAKYS RSTDRSLQRL LSAFQDVEVK KIGIYGAGGI 300 GKTTLMKAFL SRYDVKRSFD LVLWVTIPRC SSRRQIQNSL IQQLSLNVPN IKSDDEVAMI 360 LLQILLARKF ILFLDDVWEY IDLPMVGIPI GNLDNDYMII LTTRSIHICE AMEVDRTIEA 420 QVLSRKESLQ LFRFHVGNVM DSEDIEPYGR AIVDECSGLP LAIKVAGSAL RMDSSIYAWK 480 STVKNILLTN CLQVLKIGYD RLKEHDIRSS FLYHALFTER KAVSISSLVG YLVDEGIVSG 540 SMSDAHRRGH DIIKYLIDVS LLQCTDDGLM VEMHGFLRDL ALVILSDAKG LQMFLIRYFR 600 SILSQKTLLS HISNPTFEQP EGHLSILKAG DDLSEPPSEE EWEEAKMVFL MDNTLSSLPK 660 RPACSKLLAL FLQRNSCLRV IPSSFFDNMS SLQILNLSKT RIKSLPQSLT KLECLQVLIL 720 RNCQRLFFLP PTIGALKHLL VLDVHGTEIC QLPDQICELL CLVHLQVCFY GSMDEDECAM 780 LPPQLISKGI ISSLVQLKEL SINVYPGDPR WTKVASDVTT EVSNLKLCSL SFHFPELKNL 840 EYFIDASPAW LHQTLTHFKF VVGHDVKRVV SHVSDDLEHE YCQHDRCLRF VNGEGMPDAV 900 GKVLSQATAF YVDHHLTAQS LTQFGRATIN DLKICVVRDC PKLKAIISST KRTGNFFPFL 960 ELLSIHYSWN LTWIWAGPIR AGSLSRLRRL SVHSCPKLEF ILCRSMVAVL SNLEELIVED 1020 CQSLKNVISN QDQSSVDDNI GDSDFCELTV TDVNSIEDVG KDQMEVDPPV SAELRLKVLK 1080 LHYLPKLVSI WNGGGIPCLE YISIYNCPRM KNLDLKSSVE ATIKEIKAET SWWDGLEWRD 1140 PALPAKLQGR FKEIQSDICG SM*

Sequence ? help Back to Top

Protein Sequence Length: 1163 aa Download sequence

MKAFLSCFCK EKNPIGVRPG YETDGNGSRC FGGKLSLGGL KRMAAIEPRM VVVQELTDDG  60
YSWRKYGQKE ILGSKYPRSY FRCTYKEEGC AAVKKVQRID EGDAYQISYK GLHTCSNGAR  120
IIRSTSGASD SQSFKISFGV DDCRALEAPT VLTGTESFTI TGIPFFGSKG TNTPDSERET  180
YAKCSQNHNA DVTSQIRLDE SIISTIHNAD VTSQIRQDES IIPTIHNVDS TFSANDKTTK  240
EGEIETSLTH CRLRNVVNLG FNSWPTAKYS RSTDRSLQRL LSAFQDVEVK KIGIYGAGGI  300
GKTTLMKAFL SRYDVKRSFD LVLWVTIPRC SSRRQIQNSL IQQLSLNVPN IKSDDEVAMI  360
LLQILLARKF ILFLDDVWEY IDLPMVGIPI GNLDNDYMII LTTRSIHICE AMEVDRTIEA  420
QVLSRKESLQ LFRFHVGNVM DSEDIEPYGR AIVDECSGLP LAIKVAGSAL RMDSSIYAWK  480
STVKNILLTN CLQVLKIGYD RLKEHDIRSS FLYHALFTER KAVSISSLVG YLVDEGIVSG  540
SMSDAHRRGH DIIKYLIDVS LLQCTDDGLM VEMHGFLRDL ALVILSDAKG LQMFLIRYFR  600
SILSQKTLLS HISNPTFEQP EGHLSILKAG DDLSEPPSEE EWEEAKMVFL MDNTLSSLPK  660
RPACSKLLAL FLQRNSCLRV IPSSFFDNMS SLQILNLSKT RIKSLPQSLT KLECLQVLIL  720
RNCQRLFFLP PTIGALKHLL VLDVHGTEIC QLPDQICELL CLVHLQVCFY GSMDEDECAM  780
LPPQLISKGI ISSLVQLKEL SINVYPGDPR WTKVASDVTT EVSNLKLCSL SFHFPELKNL  840
EYFIDASPAW LHQTLTHFKF VVGHDVKRVV SHVSDDLEHE YCQHDRCLRF VNGEGMPDAV  900
GKVLSQATAF YVDHHLTAQS LTQFGRATIN DLKICVVRDC PKLKAIISST KRTGNFFPFL  960
ELLSIHYSWN LTWIWAGPIR AGSLSRLRRL SVHSCPKLEF ILCRSMVAVL SNLEELIVED  1020
CQSLKNVISN QDQSSVDDNI GDSDFCELTV TDVNSIEDVG KDQMEVDPPV SAELRLKVLK  1080
LHYLPKLVSI WNGGGIPCLE YISIYNCPRM KNLDLKSSVE ATIKEIKAET SWWDGLEWRD  1140
PALPAKLQGR FKEIQSDICG SM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24110.1	2e-21	WRKY family protein