PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62020634-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 298aa MW: 33732.1 Da PI: 9.0088 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 178.4 | 2e-55 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL k+++ ++++ +++++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ AUR62020634-RA 14 LPPGFRFHPTDEELITYYLVSKISDATFSC-RAVADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNS 107 79****************************.88***************99999****************************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++elvg+kktLvfy+grap+gekt+Wvmheyr+ AUR62020634-RA 108 vTTELVGMKKTLVFYRGRAPRGEKTNWVMHEYRV 141 88999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MEGGDQQQPK DENLPPGFRF HPTDEELITY YLVSKISDAT FSCRAVADVD LNKCEPWDLP 60 GKAKMGEKEW YFFSLRDRKY PTGVRTNRAT NTGYWKTTGK DKEIFNSVTT ELVGMKKTLV 120 FYRGRAPRGE KTNWVMHEYR VHSRSAYRSA KDEWVVCRVF QKSAGIKKYP TTQSTRAINL 180 EMGQSHILPP AMLPIDPAQF NLGRNYMMHN HVDQLAELSR ALRTSGATRG GATQGPPPLR 240 PMINQQGAQH DVTSSMLSGL ESGYVQLDMN INGHGGSSNR FMNVDNCVEF DNYWPTY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 1e-107 | NAC family protein |