PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62020261-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 259aa MW: 29053.5 Da PI: 8.5663 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 137.6 | 8e-43 | 4 | 131 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrF Pt+eel+ +yL+++ + +l++vi+++diy++eP++Lp ++ ++++w+fF+++++++a+g r+nr+t+sgyWkatg+ AUR62020261-RA 4 LPPGFRFYPTEEELIAFYLHNSQR---PDLHRVIPSIDIYNFEPSQLPGlageLCHRDTEQWFFFTPQQEREARGGRPNRTTASGYWKATGSPSY 95 79*****************98654...455678***************545653444677*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyr 127 v+s++++++g+kktLvfykg+ap g+kt+W m+ey+ AUR62020261-RA 96 VYSSQNKVIGVKKTLVFYKGKAPIGRKTKWKMNEYK 131 ***********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MEQLPPGFRF YPTEEELIAF YLHNSQRPDL HRVIPSIDIY NFEPSQLPGL AGELCHRDTE 60 QWFFFTPQQE REARGGRPNR TTASGYWKAT GSPSYVYSSQ NKVIGVKKTL VFYKGKAPIG 120 RKTKWKMNEY KAIKQQDFQT INASSITTSI PELKHGLSLC RVYITSGCAR AFDRRPPGTI 180 LSDLNPQNYQ AIQASGKGSQ SADATPLLME KSSSTDSFNS RCDDQGTVRE AGAGSSYNSE 240 FELAEDGFFS DWKQLGRF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 2e-80 | NAC family protein |