PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020251-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 431aa    MW: 48339.2 Da    PI: 9.5892
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020251-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM117.41.4e-36211781128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee............................vikevdiykvePwdLpk....kvkaeekewyfFsk 63 
                     + pGfrF+P deel+ +yL+kk++g +  + e                             i +++++kv    L+     ++ ++++ew+fFs+
  AUR62020251-RA  21 MFPGFRFSPIDEELILYYLTKKLDGFHKCV-EvipellsfpvlssnvglsraeerdkaclSIFHLQLTKVSIAVLHYltakAIIKSDQEWFFFSP 114
                     579**********************99444.324566677777778888877777777763555555555555554234444445789******* PP

             NAM  64 rdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     r kky++g++++rat+ gyWkatgk+++v+s +++++g+k+tLvf+ grapkge+t+W+mhey +
  AUR62020251-RA 115 RGKKYPNGSQSKRATEIGYWKATGKERAVKS-GSNVIGTKRTLVFHIGRAPKGERTEWIMHEYCM 178
                     ******************************9.99*****************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MDGVSVSISK EAERSIAASS MFPGFRFSPI DEELILYYLT KKLDGFHKCV EVIPELLSFP  60
VLSSNVGLSR AEERDKACLS IFHLQLTKVS IAVLHYLTAK AIIKSDQEWF FFSPRGKKYP  120
NGSQSKRATE IGYWKATGKE RAVKSGSNVI GTKRTLVFHI GRAPKGERTE WIMHEYCMSG  180
KAQDALVVCR LRRKCDYHAM NNVPDGEMNQ SSNPSMLMAS RGTYSNCGMG LIDNNTPGRD  240
KQTVECSFKK SSSSHDSHSV EQINSASQSN WKNKDYAFQP ESTSINHVGN EDDLFAEILN  300
DSIIQLDECL HPSTFGAQPM LANNGTVPVV PRIFNNPSHN HVVQRVSPAQ GTANRRIRLR  360
KLRRLGPRKE ELEEGSGENM VNSKSRRFFK KVPEGWMRIS KNCSRLYVLV ITMALLILMM  420
GYSTGPAYFY *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1355361RRIRLRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.11e-72NAC family protein