PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62019936-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 342aa MW: 39174.8 Da PI: 7.1821

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62019936-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167	6.2e-52	11	140	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yLkkkv+ +k++l +vi++++++k+ePwd+++ k+ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + AUR62019936-RA 11 VPPGFRFHPTEEELLQYYLKKKVAYEKIDL-DVIRDINLNKLEPWDIQEkcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKMI 104 69**************************.9***********952444443456******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s +++ +g++ktLvfykgrap+gek+dW+mheyrle AUR62019936-RA 105 HS-NNKRIGMRKTLVFYKGRAPHGEKSDWIMHEYRLE 140 .9999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MNLSVNGHSK VPPGFRFHPT EEELLQYYLK KKVAYEKIDL DVIRDINLNK LEPWDIQEKC 60 KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKMIHSNNKR IGMRKTLVFY 120 KGRAPHGEKS DWIMHEYRLE DCGSNTVHDH HSFVPRQDNC TTEEGWVICR VFKKKNYQKA 180 SDSPRCFPTS TDPQTQLLNF SSKKVLDHLF SCMEKTTYED EITNNHDHPT TCTSTATNNN 240 IIPTYNCCTK TTPSIEVSNH QLLLNNQFSV ENDQYNNLPM LTCSNNSSPQ PFNEDDPMLT 300 CSGNTTSLSD WITLDRLIAS QLNGQDHQDL ICSNSSVMYH G*

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MNLSVNGHSK VPPGFRFHPT EEELLQYYLK KKVAYEKIDL DVIRDINLNK LEPWDIQEKC  60
KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKMIHSNNKR IGMRKTLVFY  120
KGRAPHGEKS DWIMHEYRLE DCGSNTVHDH HSFVPRQDNC TTEEGWVICR VFKKKNYQKA  180
SDSPRCFPTS TDPQTQLLNF SSKKVLDHLF SCMEKTTYED EITNNHDHPT TCTSTATNNN  240
IIPTYNCCTK TTPSIEVSNH QLLLNNQFSV ENDQYNNLPM LTCSNNSSPQ PFNEDDPMLT  300
CSGNTTSLSD WITLDRLIAS QLNGQDHQDL ICSNSSVMYH G*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	2e-94	NAC family protein