PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019922-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 353aa    MW: 39875.6 Da    PI: 7.1014
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019922-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.24e-15177224254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r++h e+Er+RR+++N++f +Lr+++P        K++Ka+ L  Av YI++L
  AUR62019922-RA 177 RTNHVEAERQRRNKLNQCFYTLRSVVPYV-----SKMDKASLLSDAVTYINEL 224
                     99**************************6.....5***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MSFKQRLQTI VESRQGLLYA MLWQTTPGVE NMMTTPAASN ISSRRVLACS DGYLRSCSIR  60
SSLDEEIVMT SDAEWFYANS IGKHLIIEDN YNLVIGEAMT SGSYLWLINN SGCERAREAL  120
QHYVRTLVFV PVASGGVIEI GSMDEIKEDR SLIELAFSIF TRSHSKAVTP PVMHAHRTNH  180
VEAERQRRNK LNQCFYTLRS VVPYVSKMDK ASLLSDAVTY INELKSAVRN LEEKLQERPS  240
VSTINSSFSP HLQDLLPHHP TTKGWPIEVE VEVKSIGKEV VIRARTMGLD HPEARVMNVL  300
KDLRLEICYA TISHVNEVVF QNIIAKMPLY PDELTSTQDS LTNAIRQRLQ YS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32640.17e-35bHLH family protein