PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019337-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 339aa    MW: 37336.4 Da    PI: 4.7472
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019337-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.3e-12100150255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + +h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI +Lq
  AUR62019337-RA 100 KISHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYITELQ 150
                     5689************************9...9*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGDSISSFFD DQDLCDATFS GLPASPEDLF SIFDALENED TTKGGFMMSS FQDLSETELD  60
ALEAELGDND HQPKSKRAKI VTLEEREETV GQVGSEDGSK ISHITVERNR RKQMNEHLSV  120
LRSLMPCFYV KRGDQASIIG GVVDYITELQ QLLQALEAKK QRKVYNEVLS PRVVSSPRPS  180
PQVLSPRKPP LSPRINLPIS PRTPQPGSPY RPRMNISSAM GSPIDLSPSS SSSSINDCFP  240
NELVANSRSP MAVVEVKFSG PNLLLKTVSP RIPGQVVKII STLEELSFEI LHINIITVED  300
TMLNSFTIKI GIECQLSAEE LAHQIQQTFC STPLINFN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.11e-85bHLH family protein