PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019260-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 377aa    MW: 42038.4 Da    PI: 6.5126
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019260-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.7e-13314359655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  AUR62019260-RA 314 SIAERVRRTRISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 359
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MDSEQQQYQH HFQDFPRQFH QQKQQTNGGE RRDFPAARPL SPETECIFAR FMNSIDEEDN  60
SSQKLSNIPE NAAVQPEFTM MYHSQSKPPL SNHHNTAVSS AMQNTFRAAA SSSMGIDSIS  120
HMKTGFGGGI NNSNSGLTRH SSSPAGFFAN LNIDTTGYGM MGGMGSYGGS NVQVNYSSGQ  180
PSSTSELVNQ NSDVGAKRLR MNSLDETKFS NSSNNPNDDS NYDFPMNSWD DSILSENFSG  240
LDRVADEDIK VFPELNASEN QSGEIKNRPP PLTHHLSLPK TLPELSNMEK FLQFQDSTPL  300
RIRAKRGCAT HPRSIAERVR RTRISERMRK LQDLVPNMDK QTNTADMLDL AVDYIKDLQK  360
HVENLADNRA KCTCSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.14e-58bHLH family protein