PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62018984-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 121aa MW: 13498.2 Da PI: 8.0665 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.5 | 3.2e-10 | 54 | 84 | 1 | 31 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas 31 +r++h ++Er+RR+++N+ ++ +r+l+P+++ AUR62018984-RA 54 QRMTHIAVERNRRKQMNEYLAVIRSLMPPSY 84 79**************************963 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MYVTTAGYSS PEDNLCLSGE APLPSTAAET PESGGVRRKR RRRSCKNKEE VEHQRMTHIA 60 VERNRRKQMN EYLAVIRSLM PPSYVQRVEE GCQLNSVDDI AAAANHILGQ IKEEAVDRSL 120 * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 37 | 43 | RRKRRRR |
2 | 38 | 42 | RKRRR |
3 | 38 | 44 | RKRRRRS |
4 | 55 | 66 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22490.1 | 3e-23 | bHLH family protein |