PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018713-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 632aa MW: 68668.7 Da PI: 5.9551

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018713-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.2e-12	443	488	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L AUR62018713-RA 443 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 488 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MMNLCSSDDI NGSSSSSLLM TDSYNPSIST TASAAAHDTL HSRLQALIDV PATPRGESWT 60 YAIFWQYSID YSGQSLLGWG DGYYKGEDKQ TRQEKAATNR ISQDLAEQEH RKKVLRELNS 120 LISGASPPED SAVEEEVTDT EWFFLISMTN TFASGEDLPG QAHLSSSPIW AAGLERLSSS 180 PCNRAKQGSC FGLQTMVSIP VLNGVVELGS TEVIFQSPDL MNKVRVLFCF GPGSGPNDPG 240 CSWPVPAAVP GSTPVPSGES DPTAMWINDP NPPEVKETRK SPTPPPPPAT IQQQSQPELN 300 FSEYAGLNGS GSKSNGSLKP ESGEILSFGG GDVKKSVNNG NSNTIFGANS QFLMDENSNK 360 KKRCSPNSRG SNDEGMLSFT SGVILASSGV GKSSNNGGAH SEHSDLEASV REVDSSRVVA 420 PEPEKRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNVS KMDKASLLGD 480 AISYINELKS KLTDFESEKE GLVGQVEELK KELLSSKGGV GSLSHHQQQP PPHFDNDIKV 540 NGIKQPHLVD LEIDVKIIGW EAMIRVNCNK KNHPAARLMT ALKELDLEVT HASVSVVNDL 600 MIQQATFKMG NRYYSQEQLR MVLTSKVSDP R*

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MMNLCSSDDI NGSSSSSLLM TDSYNPSIST TASAAAHDTL HSRLQALIDV PATPRGESWT  60
YAIFWQYSID YSGQSLLGWG DGYYKGEDKQ TRQEKAATNR ISQDLAEQEH RKKVLRELNS  120
LISGASPPED SAVEEEVTDT EWFFLISMTN TFASGEDLPG QAHLSSSPIW AAGLERLSSS  180
PCNRAKQGSC FGLQTMVSIP VLNGVVELGS TEVIFQSPDL MNKVRVLFCF GPGSGPNDPG  240
CSWPVPAAVP GSTPVPSGES DPTAMWINDP NPPEVKETRK SPTPPPPPAT IQQQSQPELN  300
FSEYAGLNGS GSKSNGSLKP ESGEILSFGG GDVKKSVNNG NSNTIFGANS QFLMDENSNK  360
KKRCSPNSRG SNDEGMLSFT SGVILASSGV GKSSNNGGAH SEHSDLEASV REVDSSRVVA  420
PEPEKRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNVS KMDKASLLGD  480
AISYINELKS KLTDFESEKE GLVGQVEELK KELLSSKGGV GSLSHHQQQP PPHFDNDIKV  540
NGIKQPHLVD LEIDVKIIGW EAMIRVNCNK KNHPAARLMT ALKELDLEVT HASVSVVNDL  600
MIQQATFKMG NRYYSQEQLR MVLTSKVSDP R*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	425	433	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-153	bHLH family protein