PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018701-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 300aa MW: 33570.5 Da PI: 8.3486

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018701-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.5	2.8e-14	87	138	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A+e++k+L+ AUR62018701-RA 87 QRMTHITVERNRRKQMNEHLAVLRSLMPES---YAQRGDQASIVGGAIEFVKELE 138 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MALEAMPNCN DIFNFMVYET LNAPIYGSNF GIMEDVVVVE QPKVLGGTSG CPSHRTDSRR 60 VNLGVQGKKK RRRKPKVCKN KEEAETQRMT HITVERNRRK QMNEHLAVLR SLMPESYAQR 120 GDQASIVGGA IEFVKELEHL VHSLEVQKMI MLQQAEITRS ETGHSTPTTT HNNSTLLTPL 180 PEFFSDSDHS FSQLGNKYTL KSKAAAAEVE VTLIETHANI RILSKKNPRQ LSKLVSGFHT 240 FRFTILHLSV TTLEPLVLYS ISAKVEEGCQ LNSVDSIAEG VHHMLRIIEQ DVAPSFLAY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	73	KKKRRR
2	68	74	KKKRRRK
3	68	75	KKKRRRKP
4	69	74	KKKRRR
5	69	74	KKRRRK
6	88	99	RMTHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	4e-65	bHLH family protein