PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018515-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 376aa MW: 41578.6 Da PI: 6.3365

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018515-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.3	1.5e-09	184	231	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka++L + ++Y++sLq AUR62018515-RA 184 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKATVLDEIINYVQSLQ 231 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MMIMGNNNNY PIQSNLGSFN ADPGFVERAA KLSCFGNGFD DFVGVNSNTN HRLVAKLESG 60 KLSRVNSDKK LGENGELGDS REGSSVSEQN PGVEIAVKPQ IDPISRKRKS ASKAKVKDTT 120 PKDDKVEEVE NEESNAKRSK LDEKDGKKEN TEQNAGESNK EVTKPEPPKD YIHVRARRGQ 180 ATDSHSLAER VRREKISERM KFLQDLVPGC NKVTGKATVL DEIINYVQSL QRQVEFLSMK 240 LATVNPRMEF NMEALLSKDM FQSRGSSVPQ TMYQIDQNSA AQAFPYGYQS NQQMSLPLPN 300 GVENPFPANP MNVSGIRRNP SIPMSSIEGF IDSITQLPNL WEDDLQSLVQ MGIAQNQTQN 360 VPAGTLPNGQ MKVEL*

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MMIMGNNNNY PIQSNLGSFN ADPGFVERAA KLSCFGNGFD DFVGVNSNTN HRLVAKLESG  60
KLSRVNSDKK LGENGELGDS REGSSVSEQN PGVEIAVKPQ IDPISRKRKS ASKAKVKDTT  120
PKDDKVEEVE NEESNAKRSK LDEKDGKKEN TEQNAGESNK EVTKPEPPKD YIHVRARRGQ  180
ATDSHSLAER VRREKISERM KFLQDLVPGC NKVTGKATVL DEIINYVQSL QRQVEFLSMK  240
LATVNPRMEF NMEALLSKDM FQSRGSSVPQ TMYQIDQNSA AQAFPYGYQS NQQMSLPLPN  300
GVENPFPANP MNVSGIRRNP SIPMSSIEGF IDSITQLPNL WEDDLQSLVQ MGIAQNQTQN  360
VPAGTLPNGQ MKVEL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	110	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	5e-70	bHLH family protein