PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62018364-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 198aa MW: 22084.8 Da PI: 7.3906 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.5 | 4.8e-13 | 48 | 95 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r h+e+E+rRR+riNs +++Lr++lP K +Ka+ L k+v+ + +L AUR62018364-RA 48 RIHHKEAEKRRRERINSHLDRLRSILPCT-----SKTDKATLLSKVVQRVLEL 95 889*************************7.....699******9999877766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MQQFSDEFPN NTTSSEMEIY RSSGSCSASF YTGLLNETTE AKALAASRIH HKEAEKRRRE 60 RINSHLDRLR SILPCTSKTD KATLLSKVVQ RVLELKRQTS ELNELDNLMI PSENDEPDLF 120 ADLNGVLSSL NLKTLRAEVS SLGGRIQSVF IVSADSSVQS DECAVFLRDA LKGVVQRSGS 180 DERLKRRRRV FDTAAEC* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 185 | 190 | KRRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 6e-34 | bHLH family protein |