PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018341-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 422aa MW: 47973.6 Da PI: 5.769

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018341-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	47.2	4e-15	86	138	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iN+ ++ Lr llP + + kKls +++ ++ eYI +Lq AUR62018341-RA 86 KKLNHNASERDRRKKINDMYSSLRALLPAtD---HRKKLSIPATVGRVLEYIPQLQ 138 6789***********************66...8888***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MLAMSPLCPT TLGWEYPSEL DTNQEFDNFD FDIDIDSMFL ANHSSSQAQD CGVNHQVLSS 60 DHAKQSESPQ GTSSTDQFDD NPLLSKKLNH NASERDRRKK INDMYSSLRA LLPATDHRKK 120 LSIPATVGRV LEYIPQLQKE VEKLARKKEV ILSKKSALQG NVGKIIQEEN PKKCIVNETT 180 SCSISSNKLG DKEMVIQIST FEILSICEVL LVLEKNGCIV IDVSSFQSFG GRTFYNIHLW 240 TEGAQGSYNV NFEKLNEVLL SLLQEQKQMQ MQMTREEDLQ QLFRFCSFAQ DAWRARILQI 300 HLKANNADQS IFDWILYYIR LVFCLQGVVN LSTPAIISEG LRQQGLFTKQ LEDNLRCLHP 360 PEIMSVYPPW VMRAILHDGV ILVDGSWNNH TYRSGMGWCP EIGGSGPHGF FWEELTMAWH 420 F*

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MLAMSPLCPT TLGWEYPSEL DTNQEFDNFD FDIDIDSMFL ANHSSSQAQD CGVNHQVLSS  60
DHAKQSESPQ GTSSTDQFDD NPLLSKKLNH NASERDRRKK INDMYSSLRA LLPATDHRKK  120
LSIPATVGRV LEYIPQLQKE VEKLARKKEV ILSKKSALQG NVGKIIQEEN PKKCIVNETT  180
SCSISSNKLG DKEMVIQIST FEILSICEVL LVLEKNGCIV IDVSSFQSFG GRTFYNIHLW  240
TEGAQGSYNV NFEKLNEVLL SLLQEQKQMQ MQMTREEDLQ QLFRFCSFAQ DAWRARILQI  300
HLKANNADQS IFDWILYYIR LVFCLQGVVN LSTPAIISEG LRQQGLFTKQ LEDNLRCLHP  360
PEIMSVYPPW VMRAILHDGV ILVDGSWNNH TYRSGMGWCP EIGGSGPHGF FWEELTMAWH  420
F*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56970.1	2e-45	bHLH family protein