PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017958-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 243aa MW: 27809.3 Da PI: 9.4754

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017958-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.7e-32	165	223	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++ +prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ AUR62017958-RA 165 LDDGYKWRKYGQKVVKNTLHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHS 223 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MLNQSLMEDH HHQIGLSSSQ MGFYLNSTNL TSFSPPLVLN HQQQSDDLKP FNNFLPSSFG 60 LDHVTSTLTQ ALLSSTKPRQ EDYLSSSFTN NLPPLFSPQK PTPNYNLWAA WGEGKEYQLA 120 GSKRSCNGDD PLLGVSTVKM KKMKARRKVR EPRFCFKTMS DVDVLDDGYK WRKYGQKVVK 180 NTLHPRSYYR CTQDNCRVKK RVERLAEDPR MVITTYEGRH IHSPSNDLDE SQGGQTQLNN 240 FW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	3e-50	WRKY family protein